Format Standardisation
GWAS Harmoniser detects common summary-statistics columns and converts uploaded files into a consistent structure for cross-study comparison, meta-analysis preparation, and genetic correlation workflows.
GWAS summary statistics
GWAS Harmoniser
GWAS Harmoniser standardises, aligns, previews, and exports GWAS summary-statistics files in a focused workflow for research data handling.
The tool supports GWAS formatting, reference allele alignment, build-aware workflows, rsID handling, quality-control previews, and reliable download preparation for downstream genetic association analysis.
Core Capabilities
Allele and Build Handling
The workflow is built for scientific correctness: it checks reference allele alignment, supports genome build detection and liftover workflows, and keeps reference asset handling deployment-safe.
Preview and Export
Researchers can inspect previews, Manhattan plots, QQ plots, alignment logs, and prepared downloads before using harmonised data in downstream analysis.
FAQ
What does GWAS Harmoniser do?
GWAS Harmoniser standardises GWAS summary statistics by detecting columns, harmonising alleles, preparing build conversion workflows, validating rsIDs, previewing quality-control plots, and exporting files for downstream analysis.
Who is GWAS Harmoniser for?
GWAS Harmoniser is built for researchers, geneticists, statistical geneticists, and bioinformaticians working with GWAS summary-statistics files.
Does GWAS Harmoniser support large GWAS files?
GWAS Harmoniser is designed around upload reliability, preview generation, background download preparation, and polling workflows for large summary-statistics files.